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American Bryological and Lichenological Society (ABLS)
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Presentations for Program:: Comparative Genomics/Transcriptomics

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SessionDate/TimeLocationTitleTypeAuthorsKeywords

Monday, June 26th

Monday, June 26th, 1:30 pm to 3:15 pm · Fort Worth Ballroom 5/Omni Hotel
Session 10: Contributed Papers: Comparative Genomics and Transcriptomics
Presiding: Jeremy Coate, Reed College
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10001June 26th 1:30 pmFort Worth Ballroom 5/Omni HotelPatterns of plastome degradation in the Aeginetieae clade of Orobanchaceae mirror those in mycorrhizal heterotrophs of Orchidaceae
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Oral PaperRandle, Christopher P.; Yu, Wen-Bin; Morawetz, Jeffery; Barrett, Craig; dePamphilis, Claude.Orobanchaceae
plastome
parasitic plant
evolution
Aeginetieae
10002June 26th 1:45 pmFort Worth Ballroom 5/Omni HotelTranscriptional Profiles of In Vivo Fertilized Rice Gametes (Oryza sativa L)
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Oral PaperRUSSELL, SCOTT D; Anderson, Sarah; Jones, Daniel; Chesnut, Joshua; Johnson, Cameron; Khanday, Imtiyaz; Sundaresan, V; Gou, Xiaoping.rice
zygote
Transcriptome
embryogenesis
10003June 26th 2:00 pmFort Worth Ballroom 5/Omni HotelGenome Evolution and Diversification in Palms
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Oral PaperBarrett, Craig; Bacon, Christine; Antonelli, Alexandre; McKain, Michael.Polyploidy
Arecaceae
Monocots
commelinids
transposable element
genome size
chromosome number
ancestral state
Whole Genome Duplication
paralogous genes
10004June 26th 2:15 pmFort Worth Ballroom 5/Omni HotelTranscriptome analysis of sexual, apomictic, and parthenogenetic genotypes in Erigeron (Asteraceae)
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Oral PaperVIRE, JAMES; NOYES, RICHARD DAVID.Asteraceae
Transcriptome
Bioinformatics
Erigeron
apomixis
10005June 26th 2:30 pmFort Worth Ballroom 5/Omni HotelThe Effect of Polyploidy on Transcriptome Size and Dosage Responses in Natural and Synthetic Polyploids
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Oral PaperCoate, Jeremy; Doyle, Jeff.Polyploidy
Transcriptome
Gene Dosage Response
June 26th 2:45 pmFort Worth Ballroom 5/Omni HotelBreak
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Monday, June 26th, 5:30 pm to 7:00 pm · Exhibit Hall/Omni Hotel
Session P: Contributed Posters: Comparative Genomics and Transcriptomics
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PGT001June 26th 5:30 pmExhibit Hall/Omni HotelDe Novo Transcriptome Assembly and Annotation of Mentzelia Section Bartonia (Loasaceae)
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Poster: Comparative Genomics/TranscriptomicsDevitt, Jessica; Schenk, John J..Differential gene expression
drought
Mentzelia
next generation sequencing
RNA-Seq
Transcriptome
PGT002June 26th 5:30 pmExhibit Hall/Omni HotelComparative transcriptomics indicate changes in cell wall organization and stress response inseedlings during spaceflight
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Poster: Comparative Genomics/TranscriptomicsJohnson, Christina; Subramanian, Aswati; Pattathil, Sivakumar; Correll, Melanie; Kiss, John.Arabidopsis
cell size
cell wall
dehydration
Transcriptome
microgravity
spaceflight
PGT003June 26th 5:30 pmExhibit Hall/Omni HotelDevelopment of PCR-based Transposable Element Assays for Verification of Pearl Millet-Napiergrass Hybrids
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Poster: Comparative Genomics/TranscriptomicsCenteno, Chris; Jessup, Russell; Hatch, Stephan; Stelly, David.Pennisetum glaucum
Pennisetum purpureum
Transposable Elements
qPCR
Comparative Genomics
Pearl Millet-Napiergrass Hybrids 
Pearl Millet
Napiergrass
Marker Survey
Vegetation survey methods comparison
Cytogenetic Survey
PGT004June 26th 5:30 pmExhibit Hall/Omni HotelIntraindividual genomic variation and mutation in apple (Malus x domestica)
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Poster: Comparative Genomics/TranscriptomicsRyan, Gillian; Ashwal, Eli; Turgman-Cohen, Salomon; Cohen, Jim.Malus
Apple
genetic diversity
variation
Rosaceae
Mutation
PGT005June 26th 5:30 pmExhibit Hall/Omni HotelGenome-wide identification of disease resistant genes in wheat (Triticum aestivum L.; Poaceae)
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Poster: Comparative Genomics/TranscriptomicsAndersen, Ethan; Nepal, Madhav P.; Ali, Shaukat; Yen, Yang; Neupane, Surendra.CNL disease resistant genes
purifying selection
gene duplication
gene diversification and maintenance 
PGT006June 26th 5:30 pmExhibit Hall/Omni HotelEvolution of the NB-ARC Protein Domain as a Major Signaling Component of the Plant Defense Response
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Poster: Comparative Genomics/TranscriptomicsAndersen, Ethan; Nepal, Madhav P..Evolution of plant immunity
plant defense surveillance
disease resistant genes
NBS-LRR proteins

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