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| Session | Date/Time | Location | Title | Type | Authors | Keywords |
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Monday, June 26th |
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| PPH001 | June 26th 5:30 pm | Exhibit Hall/Omni Hotel | Orthologfinder: A newly developed automated orthology prediction tool -A case study analyzing the transcriptomes of actinorhizal plants-
Log in to add this item to your schedule | Poster: Phylogenomics | Battenberg, Kai; Lee, Ernest K.; Chiu, Joanna C.; Berry, Alison M.; Potter, Daniel. | Orthology
Bioinformatics
Ceanothus
Datisca |
| PPH002 | June 26th 5:30 pm | Exhibit Hall/Omni Hotel | Developing Next Generation Sequencing Tools to Resolve Relationships and Test for the Monophyly of the Mentzelia Section Bartonia Pinnatifid Group
Log in to add this item to your schedule | Poster: Phylogenomics | Kelly, Khadijah; Schenk, John J.. | Genome skimming
Loasaceae
Mentzelia
next generation sequencing
phylogenomics |
Tuesday, June 27th |
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| 29001 | June 27th 1:30 pm | Fort Worth Ballroom 4/Omni Hotel | Data Assembly and Post-Processing in aTRAM for Museum Phylogenomics
Log in to add this item to your schedule | Oral Paper | Folk, Ryan; Allen, Julie; Soltis, Pamela S.; Soltis, Douglas E.; Guralnick, Robert. | aTRAM
phylogenomics
assembly
saxifragales |
| 29002 | June 27th 1:45 pm | Fort Worth Ballroom 4/Omni Hotel | tRNA Interaction Network Sheds Light on the Origin of Chloroplast
Log in to add this item to your schedule | Oral Paper | Lawrence, Travis Joseph; Ardell, David H. | Chloroplast Progenitor
tRNA
Machine Learning
Cyanobacteria |
| 29003 | June 27th 2:00 pm | Fort Worth Ballroom 4/Omni Hotel | Origin of the decaploid Oregon endemic Fragaria cascadensis (Rosaceae)
Log in to add this item to your schedule | Oral Paper | Dillenberger, Markus S.; Liston, Aaron. | target capture sequencing
Fragaria
Systematics
hybrid speciation |
| 29004 | June 27th 2:15 pm | Fort Worth Ballroom 4/Omni Hotel | Elucidating the evolutionary history of Oenothera sect. Pachylophus using phylogenomics
Log in to add this item to your schedule | Oral Paper | Patsis, Amanda; Overson, Rick; Johnson, Matt; Skogen, Krissa; Wagner, Warren; Raguso, Robert; Wickett, Norm; Levin, Rachel Ann. | Hyb-Seq
phylogenomics
Onagraceae
Oenothera
evening primrose |
| 29005 | June 27th 2:30 pm | Fort Worth Ballroom 4/Omni Hotel | A Time and a Place for Everything: Phylogenetic history and geography as joint predictors of oak plastome phylogeny
Log in to add this item to your schedule | Oral Paper | Pham, Kasey Khanh; Hipp, Andrew; Cronn, Richard; Manos, Paul. | gene flow
Hybridization
partial Mantel test
RADseq |
| 29006 | June 27th 2:45 pm | Fort Worth Ballroom 4/Omni Hotel | Phylogenomics in Cactaceae: A case study using the chollas (Cylindropuntieae, Opuntioideae, Cactaceae) reveals a common pattern out of the Chihuahuan Desert
Log in to add this item to your schedule | Oral Paper | Majure, Lucas Charles; Baker, Marc; Cloud-Hughes, Michelle; Salywon, Andrew; Neubig, Kurt M.. | Chihuahuan Desert
Cactaceae
chollas
Cylindropuntia
Grusonia
Opuntioideae
plastome
biogeography
morphological evolution |
| June 27th 3:00 pm | Fort Worth Ballroom 4/Omni Hotel | Break
Log in to add this item to your schedule | | | |
| 29008 | June 27th 3:45 pm | Fort Worth Ballroom 4/Omni Hotel | Understanding morphological diversity in Chresta (Asteraceae, Vernonieae) and its relationship with other Vernonieae subtribes
Log in to add this item to your schedule | Oral Paper | Siniscalchi, Carolina Moriani; Loeuille, Benoit; Pirani, Jose Rubens; Mandel, Jennifer R.. | Compositae
phylogeny
target capture
Chrestinae |
| 29009 | June 27th 4:00 pm | Fort Worth Ballroom 4/Omni Hotel | Genome-level phylogenetics in the taxonomically complex Camassia and Hastingsia (Asparagaceae)
Log in to add this item to your schedule | Oral Paper | Archibald, Jenny K; Monnahan, Patrick J; Olson, Karen V; Kephart, Susan R; Theiss, Kathryn E; Culley, Theresa M. | Camassia
Hastingsia
RADseq |
| 29010 | June 27th 4:15 pm | Fort Worth Ballroom 4/Omni Hotel | Using Phylogenomics to Resolve The Compositae Tree of Life
Log in to add this item to your schedule | Oral Paper | Mandel, Jennifer R.; Barker, Michael; Bayer, Randall; Dikow, Rebecca; Keeley, Sterling; Susanna, Alfonso; Watson, Linda; Funk, Vicki. | phylogenomics
Asteraceae
Compositae
evolution
genomics
Biodiversity |
| 29011 | June 27th 4:30 pm | Fort Worth Ballroom 4/Omni Hotel | Plastid genome evolution in the holomycotrophic genus Hexalectris Raf
Log in to add this item to your schedule | Oral Paper | Barrett, Craig; Kennedy, Aaron. | mycoheterotrophy
plastome
parasite
phylogenetics
pseudogene
genome size |
| 29012 | June 27th 4:45 pm | Fort Worth Ballroom 4/Omni Hotel | Phylogenomics of the phaseoloid and millettioid legumes using a target enrichment approach
Log in to add this item to your schedule | Oral Paper | Vatanparast, Mohammad; Powell, Adrian; Sherman-Broyles, Sue; Doyle, Jeff; Egan, Ashley N.. | Hyb-Seq
Polyploidy
Whole Genome Duplication
transcriptomes
beans |
Wednesday, June 28th |
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| 33001 | June 28th 8:00 am | Fort Worth Ballroom 4/Omni Hotel | Indel characters and phylogenomic analyses: application to milkweeds (Asclepias)
Log in to add this item to your schedule | Oral Paper | Boutte, Julien; Fishbein, Mark; Straub, Shannon C.K.. | NGS
Hyb-Seq
Phylogenetically informative characters (PICs)
Large insertions/deletions
Non-coding regions |
| 33002 | June 28th 8:15 am | Fort Worth Ballroom 4/Omni Hotel | Intragenomic Variation in the ITS2 rRNA: Results from Deep-Sequencing of Haematococcus
Log in to add this item to your schedule | Oral Paper | Alanagreh, Lo'ai; Buchheim, Mark Alan. | ITS2
Haematococcus
Chlamydomonas
next generation sequencing
Intragenomic Variation
Concerted Evolution |
| 33003 | June 28th 8:30 am | Fort Worth Ballroom 4/Omni Hotel | Mapping species boundaries: phylogenomics and patterns of gene flow in threatened Mascarene Diospyros (Ebenaceae)
Log in to add this item to your schedule | Oral Paper | Linan, Alexander; Schatz, George; Lowry, Porter; Miller, Allison; Edwards, Christine. | Sympatry
gene flow
Conservation genetics
species boundaries
Hybridization
RAD-Seq |
| 33004 | June 28th 8:45 am | Fort Worth Ballroom 4/Omni Hotel | Relationships within the wheat tribe Triticeae (Poaceae): phylogenetic trees based on chloroplast genomes and 150 nuclear loci
Log in to add this item to your schedule | Oral Paper | Mason-Gamer, Roberta J.; White, Dawson. | Hyb-Seq
targeted sequence enrichment
phylogenomics
Gramineae |
| 33005 | June 28th 9:00 am | Fort Worth Ballroom 4/Omni Hotel | Phylogenomics of high-elevation genera of Andean Vaccinieae
Log in to add this item to your schedule | Oral Paper | Ortiz, Edgardo M.; Simpson, Beryl B.. | Ericaceae
Vaccinieae
blueberry
phylogenomics
phylogenetics
chloroplast
mitochondrion
nuclear ribosomal cistron
Genome skimming |
| 33006 | June 28th 9:15 am | Fort Worth Ballroom 4/Omni Hotel | Whole chloroplast sequencing for Asteraceae tribe Astereae; methodology and phylogenetic ramifications
Log in to add this item to your schedule | Oral Paper | NOYES, RICHARD DAVID; KLING, Brittany. | Asteraceae
Astereae
plastid genome
phylogenetics |
| 33007 | June 28th 9:30 am | Fort Worth Ballroom 4/Omni Hotel | Diversification and gene flow in Anacampseros (Anacampserotaceae) in the Greater Cape Floristic Region, South Africa
Log in to add this item to your schedule | Oral Paper | Moore, Abigail J; Hancock, Lillian P; Legg-Jack, Ibikari T; Talkington, Augustus B; Edwards, Erika J. | Portullugo
Portulacineae
succulents
CAM photosynthesis |
